Test Details
Methodology
Illumina SNP Array
Use
Apolipoprotein E (apoE) is a component of several lipoproteins. There are three main apoE isoforms reflecting three alleles (E2, E3 and E4), of which E3 is the most common. The APOE genotype E2/E2 is present in approximately 1% of the population and predisposes to type III hyperlipoproteinemia (dysbetalipoproteinemia).
Type III hyperlipoproteinemia involves abnormal build-up in the blood of remnant chylomicrons and VLDL particles (collectively called B-VLDL) containing cholesterol and triglycerides. Excess B-VLDL is taken up in blood vessel walls and can lead to atherosclerosis. Therefore, individuals with type III hyperlipoproteinemia have high total serum cholesterol, LDL and triglycerides. The main clinical manifestation is premature atherosclerosis, leading to coronary artery disease or peripheral vascular disease. However, some patients may be asymptomatic.
Only 1% to 5% of individuals with the E2/E2 genotype develop type III hyperlipoproteinemia. However, the E2/E2 genotype is present in 95% of individuals with type III hyperlipoproteinemia and is diagnostic of the disorder in individuals with the appropriate lipid profile. A number of secondary factors are known to provoke type III hyperlipoproteinemia in individuals with the E2/E2 genotype, including glucose intolerance, diabetes mellitus, hypothyroidism, obesity, low estrogen levels and excessive alcohol intake.
Limitations
APOE E2, E3 and E4 are validated for this analysis. The rare APOE E1/E1, E1/E2 and E1/E3 genotypes are reported as failed results. E2/E4 and E1/E3 genotypes cannot be distinguished by this assay. Molecular-based testing is highly accurate, but as in any laboratory test, rare errors may occur. False positive or false negative results may occur for reasons that include genetic variants, blood transfusions, bone marrow transplantation, somatic or tissue-specific mosaicism, rare technical errors, mislabeled samples or erroneous representation of family relationships.
Approximately 95% of individuals with type III hyperlipoproteinemia have the E2/E2 genotype. The remainder have rare pathogenic variants in the APOE gene, some of which are not detectable by this APOE genotype test. This test cannot detect genetic abnormalities elsewhere in the genome.
Specimen Requirements
Specimen
Whole blood
Volume
One adult tube
Minimum Volume
One adult tube
Container
Lavender-top (EDTA) whole blood
Collection Instructions
Invert tube immediately eight to 10 times once tube is filled at time of collection.
Stability Requirements
| Temperature | Period |
|---|---|
| Refrigerated | 2 months |
LOINC® Map
| Order Code | Order Code Name | Order Loinc | Result Code | Result Code Name | UofM | Result LOINC |
|---|---|---|---|---|---|---|
| 125561 | APOE Genotyping: Cardio Risk | 125562 | APOE Genotyping Result: | Pending | ||
| 125561 | APOE Genotyping: Cardio Risk | 125563 | Additional Comments | Pending | ||
| 125561 | APOE Genotyping: Cardio Risk | 125538 | Limitations | 62364-5 | ||
| 125561 | APOE Genotyping: Cardio Risk | 125547 | Methodology | 49549-9 | ||
| 125561 | APOE Genotyping: Cardio Risk | 125564 | Background Information | Pending | ||
| 125561 | APOE Genotyping: Cardio Risk | 125566 | References | Pending | ||
| 125561 | APOE Genotyping: Cardio Risk | 125554 | Result release: | 18771-6 | ||
| Order Code | 125561 | |||||
| Order Code Name | APOE Genotyping: Cardio Risk | |||||
| Order Loinc | ||||||
| Result Code | 125562 | |||||
| Result Code Name | APOE Genotyping Result: | |||||
| UofM | ||||||
| Result LOINC | Pending | |||||
| Order Code | 125561 | |||||
| Order Code Name | APOE Genotyping: Cardio Risk | |||||
| Order Loinc | ||||||
| Result Code | 125563 | |||||
| Result Code Name | Additional Comments | |||||
| UofM | ||||||
| Result LOINC | Pending | |||||
| Order Code | 125561 | |||||
| Order Code Name | APOE Genotyping: Cardio Risk | |||||
| Order Loinc | ||||||
| Result Code | 125538 | |||||
| Result Code Name | Limitations | |||||
| UofM | ||||||
| Result LOINC | 62364-5 | |||||
| Order Code | 125561 | |||||
| Order Code Name | APOE Genotyping: Cardio Risk | |||||
| Order Loinc | ||||||
| Result Code | 125547 | |||||
| Result Code Name | Methodology | |||||
| UofM | ||||||
| Result LOINC | 49549-9 | |||||
| Order Code | 125561 | |||||
| Order Code Name | APOE Genotyping: Cardio Risk | |||||
| Order Loinc | ||||||
| Result Code | 125564 | |||||
| Result Code Name | Background Information | |||||
| UofM | ||||||
| Result LOINC | Pending | |||||
| Order Code | 125561 | |||||
| Order Code Name | APOE Genotyping: Cardio Risk | |||||
| Order Loinc | ||||||
| Result Code | 125566 | |||||
| Result Code Name | References | |||||
| UofM | ||||||
| Result LOINC | Pending | |||||
| Order Code | 125561 | |||||
| Order Code Name | APOE Genotyping: Cardio Risk | |||||
| Order Loinc | ||||||
| Result Code | 125554 | |||||
| Result Code Name | Result release: | |||||
| UofM | ||||||
| Result LOINC | 18771-6 |